BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024D06SP1|AL428209
(1020 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1999 0.0
>3x_Contig1801
Length = 57606
Score = 1999 bits (1006), Expect = 0.0
Identities = 1009/1012 (99%)
Strand = Plus / Minus
Query: 1 aacgaccaattcgatgtgagatggagaagattcgtatttgttaattctaccgtgagctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45170 aacgaccaattcgatgtgagatggagaagattcgtatttgttaattctaccgtgagctct 45111
Query: 61 gaaggttcttcttctttgctttggagcttggttaacttgaatgtgagagacgtacaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45110 gaaggttcttcttctttgctttggagcttggttaacttgaatgtgagagacgtacaatct 45051
Query: 121 ggtagcgtctaaacccttagcctgtggaaatgattaattgaaattacaacggatgtwatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 45050 ggtagcgtctaaacccttagcctgtggaaatgattaattgaaattacaacggatgtaatt 44991
Query: 181 tttgataaaatttgttagtaaaagtttcatttaatttggtatagtggggagaataagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44990 tttgataaaatttgttagtaaaagtttcatttaatttggtatagtggggagaataagctg 44931
Query: 241 ttagaagttagtttgctgagaatggaatatcttgattctggtggttcacattttagtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44930 ttagaagttagtttgctgagaatggaatatcttgattctggtggttcacattttagtagc 44871
Query: 301 tcaggttatgattattccatgatcataatttctgatgagttgtctagttctgcaatatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44870 tcaggttatgattattccatgatcataatttctgatgagttgtctagttctgcaatatca 44811
Query: 361 tatcttgtcttgtactggctcatttctgtacatcgttctattttgtatcggtctcatttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44810 tatcttgtcttgtactggctcatttctgtacatcgttctattttgtatcggtctcatttg 44751
Query: 421 ttcatatatatgccatcgttttcgccccacgtattcattcttccaacatatccatcgact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44750 ttcatatatatgccatcgttttcgccccacgtattcattcttccaacatatccatcgact 44691
Query: 481 catcccactaattcgtacatcacagggcctacaccctatgtgtttcacaatatcaaatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44690 catcccactaattcgtacatcacagggcctacaccctatgtgtttcacaatatcaaatgt 44631
Query: 541 tataacatacttcagcgttagaggcagcgttttgcaacaaaccttggacgaacttgacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44630 tataacatacttcagcgttagaggcagcgttttgcaacaaaccttggacgaacttgacag 44571
Query: 601 acttagctggccatctagccttggtgacaccgaattccttaccttgggcagttctaccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44570 acttagctggccatctagccttggtgacaccgaattccttaccttgggcagttctaccaa 44511
Query: 661 tagaagagttgaatcttctgaatggaatagctctttggtgatccaaaacttggtccaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44510 tagaagagttgaatcttctgaatggaatagctctttggtgatccaaaacttggtccaagt 44451
Query: 721 acttttgagccttttgtaaattccaaccactgatagcttgagcagtttctctggtgttct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44450 acttttgagccttttgtaaattccaaccactgatagcttgagcagtttctctggtgttct 44391
Query: 781 tgtaagaaacacgcaagtwggaaccacgagcagaagcagacttagctgggttagtggaag 840
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 44390 tgtaagaaacacgcaagtaggaaccacgagcagaagcagacttagctgggttagtggaag 44331
Query: 841 tagcaccgtatctagccattgtgtatcactctgtttgaaggtcttagttctcggtcctgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44330 tagcaccgtatctagccattgtgtatcactctgtttgaaggtcttagttctcggtcctgt 44271
Query: 901 atcaaaacactaattwacacgtctaaaccactactctttaatatatggtaacaatgtata 960
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44270 atcaaaacactaattaacacgtctaaaccactactctttaatatatggtaacaatgtata 44211
Query: 961 tatgctatattatcgtatattctttattcacaatatttccaaatttccaaac 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44210 tatgctatattatcgtatattctttattcacaatatttccaaatttccaaac 44159
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8142
Number of Sequences: 1807
Number of extensions: 8142
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 1020
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1004
effective length of database: 10,329,639
effective search space: 10370957556
effective search space used: 10370957556
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)